Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 39 curated entries in PaperBLAST's database that match '6.3.5.4' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_19230: asparagine synthase is similar to:	PaperBLAST
asnO / GI\|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis	29% id, 94% cov
ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis	36% id, 61% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	36% id, 60% cov
ASNB_ECOLI / P22106: Asparagine synthetase B [glutamine-hydrolyzing]; AS-B; EC 6.3.5.4 from Escherichia coli AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli asnB: asparagine synthetase B, glutamine-hydrolyzing; EC 6.3.5.4 from Escherichia coli asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli	40% id, 30% cov
F2DDF6: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	32% id, 35% cov
Q14SM9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Glycine max	36% id, 29% cov
B3KYI2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	36% id, 29% cov
ASNS2_ARATH / Q9LV77: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Arabidopsis thaliana	34% id, 28% cov
D9IXC8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	35% id, 28% cov
ASNS2_YEAST / P49090: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Saccharomyces cerevisiae	32% id, 29% cov
F2CQ60: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	33% id, 28% cov
ASNS2_ORYSJ / Q43011: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Oryza sativa Q43011: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	33% id, 28% cov
A0A1D5YL35: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	34% id, 25% cov
Q93XP9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	34% id, 25% cov
A0A1D5VHV8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	34% id, 25% cov
F2DJ31: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	34% id, 25% cov
Q10MX3: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	32% id, 25% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	28% id, 27% cov
ASNB_ECOLI / P22106: Asparagine synthetase B [glutamine-hydrolyzing]; AS-B; EC 6.3.5.4 from Escherichia coli AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli asnB: asparagine synthetase B, glutamine-hydrolyzing; EC 6.3.5.4 from Escherichia coli asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli	29% id, 21% cov
ASNS_SCHPO / P78753: Probable asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe asn1 / RF\|NP_595291.1: asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe	27% id, 22% cov
Q9SP19: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	27% id, 22% cov
F2DJ31: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	28% id, 21% cov
ASNS2_YEAST / P49090: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Saccharomyces cerevisiae	25% id, 23% cov
D9IXC8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	32% id, 16% cov
B3KYI2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	26% id, 20% cov
ASNS2_ARATH / Q9LV77: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Arabidopsis thaliana	35% id, 15% cov
A0A1D5YL35: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	32% id, 16% cov
Q93XP9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	32% id, 16% cov
Q9SM55: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	34% id, 15% cov
Q14SM9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Glycine max	33% id, 15% cov
E7EAQ2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	34% id, 14% cov
Q9LKQ9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	30% id, 16% cov
F2CQ60: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	33% id, 14% cov
A9XS73: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	32% id, 15% cov
ASNS2_ORYSJ / Q43011: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Oryza sativa Q43011: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	32% id, 14% cov
Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	31% id, 14% cov
More...

PS417_11435: asparagine synthase is similar to:	PaperBLAST
ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis	31% id, 88% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	31% id, 87% cov
ASNS_SCHPO / P78753: Probable asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe asn1 / RF\|NP_595291.1: asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe	31% id, 72% cov
ASNB_ECOLI / P22106: Asparagine synthetase B [glutamine-hydrolyzing]; AS-B; EC 6.3.5.4 from Escherichia coli AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli asnB: asparagine synthetase B, glutamine-hydrolyzing; EC 6.3.5.4 from Escherichia coli asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli	30% id, 66% cov
asnO / GI\|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis	30% id, 64% cov
E7EAQ2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	29% id, 60% cov
Q6HA26: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus sylvestris	29% id, 60% cov
B3KYI2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	27% id, 63% cov
Q14SM9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Glycine max	27% id, 63% cov
F2CWZ7: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	26% id, 49% cov
Q84LA5: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	26% id, 49% cov
F2DDF6: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	34% id, 35% cov
F2DDF6: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	33% id, 31% cov
ASNS2_YEAST / P49090: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Saccharomyces cerevisiae	26% id, 38% cov
D9IXC8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	33% id, 28% cov
A0A1D5VHV8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	32% id, 28% cov
ASNS2_ARATH / Q9LV77: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Arabidopsis thaliana	32% id, 28% cov
ASNS2_ORYSJ / Q43011: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Oryza sativa Q43011: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	32% id, 28% cov
Q10MX3: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	33% id, 27% cov
A0A1D5YL35: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	31% id, 28% cov
Q93XP9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	31% id, 28% cov
F2DJ31: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	31% id, 28% cov
F2CQ60: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	31% id, 28% cov
ASNS1_ARATH / P49078: Asparagine synthetase [glutamine-hydrolyzing] 1; Glutamine-dependent asparagine synthetase 1; Protein DARK INDUCIBLE 6; EC 6.3.5.4 from Arabidopsis thaliana	33% id, 26% cov
A9XS73: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	34% id, 25% cov
ASNS2_ARATH / Q9LV77: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Arabidopsis thaliana	33% id, 26% cov
Q9SP19: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	31% id, 27% cov
D9IXC8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	33% id, 25% cov
Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	33% id, 25% cov
Q9LKQ9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	32% id, 25% cov
A0A1D5VHV8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	32% id, 25% cov
Q9SM55: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	31% id, 26% cov
A0A1D5YL35: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	32% id, 25% cov
Q93XP9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	32% id, 25% cov
Q10MX3: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	32% id, 24% cov
F2DJ31: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	31% id, 25% cov
F2CQ60: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	31% id, 25% cov
ASNS2_ORYSJ / Q43011: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Oryza sativa Q43011: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	31% id, 25% cov
ASNS2_YEAST / P49090: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Saccharomyces cerevisiae	28% id, 16% cov
More...

PS417_28445: glucosamine--fructose-6-phosphate aminotransferase is similar to:	PaperBLAST
Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	27% id, 22% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	27% id, 21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory