Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 1 curated entries in PaperBLAST's database that match '[LysW]-aminoadipate semialdehyde transaminase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_21710: acetylornithine aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

43% id,
92% cov

PS417_08025: acetylornithine aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

40% id,
94% cov

PS417_19505: 2,4-diaminobutyrate 4-aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

37% id,
100% cov

PS417_23355: 4-aminobutyrate aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

36% id,
96% cov

PS417_00900: 4-aminobutyrate aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

34% id,
94% cov

PS417_25950: acetylornithine aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

34% id,
92% cov

PS417_11165: omega amino acid--pyruvate aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

32% id,
94% cov

PS417_26540: adenosylmethionine-8-amino-7-oxononanoate aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

30% id,
91% cov

PS417_01335: hypothetical protein
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

30% id,
92% cov

PS417_27130: aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

29% id,
94% cov

PS417_03245: omega amino acid--pyruvate aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

27% id,
94% cov

PS417_24610: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

34% id,
70% cov

PS417_05505: adenosylmethionine-8-amino-7-oxononanoate aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

35% id,
44% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory