Searching in Pseudomonas simiae WCS417 (WCS417)
Found 2 curated entries in PaperBLAST's database that match 'acetohydroxy acid synthase%large' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Pseudomonas simiae WCS417, or try another query
PS417_23810: acetolactate synthase 3 catalytic subunit is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 46% id, 96% cov |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 46% id, 93% cov |
PS417_08810: glyoxylate carboligase is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 35% id, 94% cov |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 34% id, 90% cov |
PS417_08225: acetolactate synthase is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 33% id, 96% cov |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 30% id, 91% cov |
PS417_07295: hypothetical protein is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 31% id, 92% cov |
PS417_10695: decarboxylase is similar to: | PaperBLAST |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 30% id, 91% cov |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 29% id, 93% cov |
PS417_12270: pyruvate dehydrogenase is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 28% id, 94% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
1916637-1918457 (frame -2) on CP007637 is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 35% id, 96% cov |
2285309-2286922 (frame +2) on CP007637 is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 29% id, 95% cov |
2665315-2667051 (frame -1) on CP007637 is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 28% id, 97% cov |
Lawrence Berkeley National Laboratory