Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 28 curated entries in PaperBLAST's database that match 'cystathionine gamma-lyase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_07505: cysteine synthase is similar to:	PaperBLAST
CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana	51% id, 96% cov

PS417_11735: methionine gamma-lyase is similar to:	PaperBLAST
6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase	47% id, 100% cov
7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa	46% id, 98% cov
Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae	47% id, 96% cov
CGL_DICDI / Q55DV9: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Dictyostelium discoideum	44% id, 99% cov
A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis	44% id, 99% cov
metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori	44% id, 99% cov
8j6nA / Q9EQS4: Crystal structure of cystathionine gamma-lyase in complex with compound 1	44% id, 97% cov
MCCB_BACSU / O05394: Cystathionine gamma-lyase; Gamma-cystathionase; Homocysteine gamma-lyase; EC 4.4.1.1; EC 4.4.1.2 from Bacillus subtilis	43% id, 98% cov
CGL_MOUSE / Q8VCN5: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Mus musculus	45% id, 95% cov
CGL_HUMAN / P32929: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Homo sapiens P32929: cystathionine gamma-lyase (EC 4.4.1.1) from Homo sapiens	44% id, 95% cov
7d7oB / Q818A3: Crystal structure of cystathionine gamma-lyase from bacillus cereus atcc 14579	42% id, 99% cov
CGL_RAT / P18757: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; Probasin-related antigen; PRB-RA; EC 4.4.1.1; EC 4.4.1.2 from Rattus norvegicus	44% id, 95% cov
6ldoA / F9UT53: Crystal structure of cystathionine gamma-lyase from lactobacillus plantarum complexed with l-serine	42% id, 98% cov
B3TNN8: cystathionine gamma-lyase (subunit 2/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei	42% id, 97% cov
B3TNN9: cystathionine gamma-lyase (subunit 1/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei	43% id, 95% cov
mecB: cystathionine gamma-lyase; EC 4.4.1.1 from Emericella nidulans B2LXT6: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus nidulans	43% id, 94% cov
Q96VU7: cystathionine gamma-lyase (EC 4.4.1.1) from Neurospora crassa	43% id, 93% cov
1n8pA / P31373: Crystal structure of cystathionine gamma-lyase from yeast	41% id, 98% cov
CYS3_YEAST / P31373: Cystathionine gamma-lyase; gamma-CTLase; Gamma-cystathionase; Sulfur transfer protein 1; EC 4.4.1.1 from Saccharomyces cerevisiae P31373: cystathionine gamma-lyase (EC 4.4.1.1) from Saccharomyces cerevisiae	41% id, 98% cov
Q4WCI1: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus fumigatus	42% id, 93% cov
7nl1D / A0A125YN40: Crystal structure of cystathionine gamma-lyase from toxoplasma gondii	39% id, 97% cov
B6K8Y1: cystathionine gamma-lyase (EC 4.4.1.1) from Toxoplasma gondii	39% id, 93% cov
E9AFE7: cystathionine gamma-lyase (EC 4.4.1.1) from Leishmania major	38% id, 93% cov
More...

PS417_18530: O-succinylhomoserine sulfhydrylase is similar to:	PaperBLAST
Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae	44% id, 99% cov
6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase	43% id, 99% cov
7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa	40% id, 99% cov
7d7oB / Q818A3: Crystal structure of cystathionine gamma-lyase from bacillus cereus atcc 14579	40% id, 98% cov
A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis	41% id, 93% cov
metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori	40% id, 94% cov
8j6nA / Q9EQS4: Crystal structure of cystathionine gamma-lyase in complex with compound 1	37% id, 97% cov
CGL_MOUSE / Q8VCN5: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Mus musculus	37% id, 98% cov
CGL_RAT / P18757: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; Probasin-related antigen; PRB-RA; EC 4.4.1.1; EC 4.4.1.2 from Rattus norvegicus	37% id, 95% cov
MCCB_BACSU / O05394: Cystathionine gamma-lyase; Gamma-cystathionase; Homocysteine gamma-lyase; EC 4.4.1.1; EC 4.4.1.2 from Bacillus subtilis	39% id, 90% cov
6ldoA / F9UT53: Crystal structure of cystathionine gamma-lyase from lactobacillus plantarum complexed with l-serine	36% id, 99% cov
CGL_DICDI / Q55DV9: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Dictyostelium discoideum	41% id, 86% cov
B3TNN9: cystathionine gamma-lyase (subunit 1/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei	41% id, 85% cov
1n8pA / P31373: Crystal structure of cystathionine gamma-lyase from yeast	36% id, 97% cov
mecB: cystathionine gamma-lyase; EC 4.4.1.1 from Emericella nidulans B2LXT6: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus nidulans	38% id, 92% cov
CYS3_YEAST / P31373: Cystathionine gamma-lyase; gamma-CTLase; Gamma-cystathionase; Sulfur transfer protein 1; EC 4.4.1.1 from Saccharomyces cerevisiae P31373: cystathionine gamma-lyase (EC 4.4.1.1) from Saccharomyces cerevisiae	36% id, 97% cov
B3TNN8: cystathionine gamma-lyase (subunit 2/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei	40% id, 85% cov
Q96VU7: cystathionine gamma-lyase (EC 4.4.1.1) from Neurospora crassa	37% id, 92% cov
Q4WCI1: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus fumigatus	37% id, 92% cov
E9AFE7: cystathionine gamma-lyase (EC 4.4.1.1) from Leishmania major	36% id, 94% cov
CGL_HUMAN / P32929: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Homo sapiens P32929: cystathionine gamma-lyase (EC 4.4.1.1) from Homo sapiens	36% id, 94% cov
7nl1D / A0A125YN40: Crystal structure of cystathionine gamma-lyase from toxoplasma gondii	36% id, 93% cov
B6K8Y1: cystathionine gamma-lyase (EC 4.4.1.1) from Toxoplasma gondii	36% id, 89% cov
More...

PS417_20160: cysteine synthase is similar to:	PaperBLAST
CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana	40% id, 93% cov

PS417_21045: cysteine synthase is similar to:	PaperBLAST
CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana	37% id, 93% cov

PS417_22095: class V aminotransferase is similar to:	PaperBLAST
Q9M1R1: cystathionine gamma-lyase (EC 4.4.1.1) from Arabidopsis thaliana	23% id, 61% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory