Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 25 curated entries in PaperBLAST's database that match 'sucrose hydrolase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_23045: trehalose-6-phosphate hydrolase
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

34% id,
83% cov

PS417_12800: alpha-amylase
is similar to:
PaperBLAST

AAM42629.1: sucrose hydrolase (SuxB;XCC3359) (EC 3.2.1.-)

31% id,
51% cov

3czkA / Q6UVM5: Crystal structure analysis of sucrose hydrolase(suh) e322q-sucrose complex

31% id,
50% cov

AAM38333.1: sucrose hydrolase (XAC3490) (EC 3.2.1.-)

31% id,
48% cov

More...

PS417_14485: malto-oligosyltrehalose trehalohydrolase
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

31% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory