Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 6 curated entries in PaperBLAST's database that match '1.1.1.175' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 24 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_614: Putative oxidoreductase in arabinose utilization cluster
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

47% id,
98% cov

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

48% id,
98% cov

Ac3H11_1292: Enoyl-[acyl-carrier-protein] reductase [NADPH] (EC 1.3.1.10)
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

36% id,
98% cov

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

32% id,
100% cov

Ac3H11_2257: Short-chain dehydrogenase/reductase SDR
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

35% id,
99% cov

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

35% id,
99% cov

Ac3H11_2074: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

35% id,
96% cov

Ac3H11_2748: Putative short-chain dehydrogenase/reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

36% id,
93% cov

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

31% id,
96% cov

Ac3H11_1498: Short-chain dehydrogenase/reductase SDR
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

35% id,
94% cov

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

32% id,
96% cov

Ac3H11_2732: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

35% id,
94% cov

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

31% id,
97% cov

Ac3H11_1578: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

34% id,
93% cov

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

31% id,
91% cov

Ac3H11_2774: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

34% id,
94% cov

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

32% id,
97% cov

Ac3H11_493: toluenesulfonate zinc-independent alcohol dehydrogenase
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

33% id,
93% cov

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

28% id,
96% cov

Ac3H11_3919: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

33% id,
92% cov

Ac3H11_2762: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

30% id,
96% cov

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

30% id,
94% cov

Ac3H11_1294: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

33% id,
86% cov

Ac3H11_360: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

29% id,
96% cov

Ac3H11_357: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

31% id,
92% cov

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

29% id,
94% cov

Ac3H11_1922: Citronellol and citronellal dehydrogenase
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

28% id,
98% cov

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

27% id,
99% cov

Ac3H11_148: 3-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

29% id,
94% cov

Ac3H11_3042: Oxidoreductase, short chain dehydrogenase/reductase family
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

29% id,
93% cov

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

28% id,
96% cov

Ac3H11_2606: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) @ 17hydroxysteroid dehydrogenase type 10 (HSD10)-like
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

28% id,
97% cov

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

28% id,
95% cov

Ac3H11_3411: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

29% id,
88% cov

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

27% id,
90% cov

Ac3H11_595: Oxidoreductase, short chain dehydrogenase/reductase family
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

34% id,
70% cov

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

35% id,
68% cov

Ac3H11_1879: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

30% id,
81% cov

Ac3H11_1727: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

25% id,
94% cov

Ac3H11_2710: short-chain dehydrogenase/reductase SDR
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

27% id,
72% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 19 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory