Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 19 curated entries in PaperBLAST's database that match '1.1.1.18' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
| Ac3H11_2877: Nucleoside-diphosphate-sugar epimerases is similar to: | PaperBLAST |
Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus | 28% id, 97% cov |
| Ac3H11_1189: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase is similar to: | PaperBLAST |
MI2D_RHIME / O68965: Inositol 2-dehydrogenase; Myo-inositol 2-dehydrogenase; MI-dehydrogenase; EC 1.1.1.18 from Rhizobium meliloti | 28% id, 69% cov |
Q9EZV8: inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium fredii | 26% id, 69% cov |
IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima | 26% id, 41% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 123420-124553 (frame +3) on scaffold5/19 is similar to: | PaperBLAST |
HSERO_RS12095: Myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Herbaspirillum seropedicae | 22% id, 99% cov |
MI2D_RHIME / O68965: Inositol 2-dehydrogenase; Myo-inositol 2-dehydrogenase; MI-dehydrogenase; EC 1.1.1.18 from Rhizobium meliloti | 25% id, 72% cov |
IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima | 25% id, 37% cov |
Lawrence Berkeley National Laboratory