Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 4 curated entries in PaperBLAST's database that match '1.1.1.312' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_1189: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni

85% id,
99% cov

proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea

85% id,
99% cov

LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp.
ligC / Q9KWL3: LigC (EC 1.1.1.312) from Sphingobium sp.

75% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory