Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 4 curated entries in PaperBLAST's database that match '1.1.1.58' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_2939: D-arabinitol 4-dehydrogenase (EC 1.1.1.11)
is similar to:
PaperBLAST

A9QSF6: tagaturonate reductase (EC 1.1.1.58) from Lactococcus lactis

24% id,
92% cov

CA265_RS19880: Altronate oxidoreductase (EC 1.1.1.58) from Pedobacter sp.

26% id,
55% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory