Curated BLAST for Genomes


Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 10 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_2201: PQQ-dependent oxidoreductase, gdhB family
is similar to:

I7A144: glucose 1-dehydrogenase (PQQ, quinone) (EC from Thermus thermophilus

38% id,
94% cov

Q8ZUN8: glucose 1-dehydrogenase (PQQ, quinone) (EC from Pyrobaculum aerophilum

31% id,
84% cov

DHGB_ACICA / P13650: Quinoprotein glucose dehydrogenase B; Glucose dehydrogenase B [pyrroloquinoline-quinone]; Soluble glucose dehydrogenase; s-GDH; EC from Acinetobacter calcoaceticus
P13650: glucose 1-dehydrogenase (PQQ, quinone) (EC; soluble quinoprotein glucose dehydrogenase (EC from Acinetobacter calcoaceticus

31% id,
64% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory