Curated BLAST for Genomes


Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 6 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_4104: Aminobutyraldehyde dehydrogenase (EC
is similar to:

L2HDH_ACHAE / A0A0M7LBC1: L-2-hydroxyglutarate dehydrogenase; EC from Achromobacter aegrifaciens

66% id,
99% cov

L2HDH_ACCRE / A0A011QK89: L-2-hydroxyglutarate dehydrogenase; EC from Accumulibacter regalis

60% id,
96% cov

L2HDH_ARATH / Q9LES4: L-2-hydroxyglutarate dehydrogenase, mitochondrial; EC from Arabidopsis thaliana

50% id,
83% cov


Ac3H11_1604: Sarcosine oxidase beta subunit (EC
is similar to:

L2HDH_HUMAN / Q9H9P8: L-2-hydroxyglutarate dehydrogenase, mitochondrial; Duranin; EC from Homo sapiens
Q9H9P8: L-2-hydroxyglutarate dehydrogenase (EC from Homo sapiens

20% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory