Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 26 curated entries in PaperBLAST's database that match '1.13.11.27' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_1849: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
is similar to:
PaperBLAST

Ac3H11_1849: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Acidovorax sp.

100% id,
100% cov

Pf6N2E2_456: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens

75% id,
98% cov

P80064: 4-hydroxyphenylpyruvate dioxygenase subunit (EC 1.13.11.27) from Pseudomonas sp.
P80064: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens

74% id,
99% cov

More...

Ac3H11_1225: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
is similar to:
PaperBLAST

Pf6N2E2_456: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens

38% id,
74% cov

PfGW456L13_2935: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens

38% id,
73% cov

AO353_26925: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens

37% id,
74% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory