Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 163 curated entries in PaperBLAST's database that match '1.13.11.5'.
These curated entries have 126 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
| Ac3H11_1187: Protocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8) is similar to: | PaperBLAST |
PmdA / Q8RNY0: protocatechuate 4,5-dioxygenase α subunit (EC 1.13.11.8; EC 1.13.11.57) from Comamonas testosteroni | 86% id, 97% cov |
GALA_PSEPK / Q88JX5: Gallate dioxygenase; Gallate degradation protein A; EC 1.13.11.57 from Pseudomonas putida | 28% id, 32% cov |
| Ac3H11_1188: Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8) is similar to: | PaperBLAST |
PmdB / Q8RNX9: protocatechuate 4,5-dioxygenase β subunit (EC 1.13.11.8; EC 1.13.11.57) from Comamonas testosteroni | 81% id, 100% cov |
desB / Q5NTE5: gallate dioxygenase monomer (EC 1.13.11.57) from Sphingomonas paucimobilis | 41% id, 66% cov |
GALA_PSEPK / Q88JX5: Gallate dioxygenase; Gallate degradation protein A; EC 1.13.11.57 from Pseudomonas putida | 41% id, 58% cov |
| Ac3H11_1156: Tryptophan 2,3-dioxygenase (EC 1.13.11.11) is similar to: | PaperBLAST |
Q8PDA8: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Xanthomonas campestris | 47% id, 91% cov |
P48776: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Mus musculus | 29% id, 73% cov |
P21643: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Rattus norvegicus | 29% id, 73% cov |
| Ac3H11_1163: Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8) is similar to: | PaperBLAST |
PmdB / Q8RNX9: protocatechuate 4,5-dioxygenase β subunit (EC 1.13.11.8; EC 1.13.11.57) from Comamonas testosteroni | 43% id, 99% cov |
desB / Q5NTE5: gallate dioxygenase monomer (EC 1.13.11.57) from Sphingomonas paucimobilis | 43% id, 66% cov |
GALA_PSEPK / Q88JX5: Gallate dioxygenase; Gallate degradation protein A; EC 1.13.11.57 from Pseudomonas putida | 39% id, 57% cov |
| Ac3H11_1164: Protocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8) is similar to: | PaperBLAST |
PmdA / Q8RNY0: protocatechuate 4,5-dioxygenase α subunit (EC 1.13.11.8; EC 1.13.11.57) from Comamonas testosteroni | 36% id, 78% cov |
desB / Q5NTE5: gallate dioxygenase monomer (EC 1.13.11.57) from Sphingomonas paucimobilis | 29% id, 25% cov |
| Ac3H11_90: Lignostilbene-alpha,beta-dioxygenase and related enzymes is similar to: | PaperBLAST |
Q8YXV3: 9-cis-epoxycarotenoid dioxygenase (EC 1.13.11.51) from Nostoc sp. | 29% id, 93% cov |
NCED3_ORYSJ / Q5MBR5: 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic; OsNCED3; EC 1.13.11.51 from Oryza sativa | 27% id, 77% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1010824-1011816 (frame -2) on scaffold5/16 is similar to: | PaperBLAST |
NSAC_SPHXE / P74836: 1,2-dihydroxynaphthalene dioxygenase; 1,2-DHN dioxygenase; DHNDO; EC 1.13.11.56 from Sphingobium xenophagum | 34% id, 86% cov |
Lawrence Berkeley National Laboratory