Curated BLAST for Genomes


Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 7 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_4711: Glutamate synthase [NADPH] small chain (EC
is similar to:

PfGW456L13_1171: Lysine 2-monooxygenase (EC from Pseudomonas fluorescens

24% id,
36% cov

Pf6N2E2_4778: Lysine 2-monooxygenase (EC from Pseudomonas fluorescens

23% id,
36% cov

Pf1N1B4_2505: Lysine 2-monooxygenase (EC from Pseudomonas fluorescens

35% id,
10% cov


Ac3H11_2953: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
is similar to:

W6JQJ6: lysine 2-monooxygenase (EC; L-amino-acid oxidase (EC from Pseudomonas sp.

41% id,
12% cov

Q88QV1: lysine 2-monooxygenase (EC from Pseudomonas putida

41% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory