Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 39 curated entries in PaperBLAST's database that match '1.4.1.2' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_315: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) is similar to:	PaperBLAST
Q9TVN3: glutamate dehydrogenase (EC 1.4.1.2) from Entodinium caudatum	55% id, 100% cov
DHE2_CLOSY / P24295: NAD-specific glutamate dehydrogenase; NAD-GDH; EC 1.4.1.2 from Clostridium symbiosum P24295: glutamate dehydrogenase (EC 1.4.1.2) from Clostridium symbiosum	52% id, 98% cov
P96110: trimer complex (EC 1.4.1.2) from Thermotoga maritima	35% id, 94% cov
GUDB_BACSU / P50735: Cryptic catabolic NAD-specific glutamate dehydrogenase GudB; NAD-GDH; EC 1.4.1.2 from Bacillus subtilis	31% id, 100% cov
gluD / GB\|AAA62756.1: NAD-specific glutamate dehydrogenase; EC 1.4.1.2 from Clostridium difficile P27346: glutamate dehydrogenase (EC 1.4.1.2) from Clostridioides difficile	33% id, 94% cov
DHE2_BACSU / P39633: Catabolic NAD-specific glutamate dehydrogenase RocG; NAD-GDH; Glutamate dehydrogenase; GlutDH; Trigger enzyme RocG; EC 1.4.1.2 from Bacillus subtilis	33% id, 91% cov
DHE2_PEPAS / P28997: NAD-specific glutamate dehydrogenase; NAD-GDH; EC 1.4.1.2 from Peptoniphilus asaccharolyticus gdhA / P28997: NAD-glutamate dehydrogenase subunit (EC 1.4.1.2) from Peptoniphilus asaccharolyticus P28997: glutamate dehydrogenase (EC 1.4.1.2) from Peptoniphilus asaccharolyticus	32% id, 94% cov
P93541: glutamate dehydrogenase (EC 1.4.1.2) from Solanum lycopersicum	31% id, 95% cov
Q852M0: glutamate dehydrogenase (EC 1.4.1.2) from Oryza sativa	31% id, 95% cov
Q0E5I0: glutamate dehydrogenase (EC 1.4.1.2) from Halobacillus halophilus	32% id, 91% cov
Q0E5H9: glutamate dehydrogenase (EC 1.4.1.2) from Halobacillus halophilus	32% id, 89% cov
DHE2_PYRCJ / A3MUY9: NAD(+)-dependent glutamate dehydrogenase; NAD-GDH; NAD-specific glutamate dehydrogenase; EC 1.4.1.2 from Pyrobaculum calidifontis A3MUY9: glutamate dehydrogenase (EC 1.4.1.2) from Pyrobaculum calidifontis	31% id, 92% cov
Q9Y8I4: glutamate dehydrogenase (EC 1.4.1.2) from Pyrobaculum islandicum	31% id, 93% cov
GDH2 / Q38946: glutamate dehydrogenase β subunit (EC 1.4.1.2) from Arabidopsis thaliana	33% id, 87% cov
DHE2_HALSI / P29051: NAD-specific glutamate dehydrogenase A; NAD-GDH A; EC 1.4.1.2 from Halobacterium salinarum gdhA / GB\|AAW19068.1: glutamate dehydrogenase; EC 1.4.1.2 from Halobacterium salinarum P29051: glutamate dehydrogenase (EC 1.4.1.2) from Halobacterium salinarum	31% id, 89% cov
Q5QDM6: glutamate dehydrogenase (EC 1.4.1.2) from Lupinus luteus	33% id, 84% cov
Q977U6: glutamate dehydrogenase (EC 1.4.1.2) from Haloferax mediterranei	29% id, 91% cov
P00366: glutamate dehydrogenase (EC 1.4.1.2) from Bos taurus	30% id, 71% cov
GDH2_SCHPO / Q9USN5: Probable NAD-specific glutamate dehydrogenase; NAD-GDH; EC 1.4.1.2 from Schizosaccharomyces pombe	29% id, 14% cov
More...

Ac3H11_3282: NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) is similar to:	PaperBLAST
P96110: trimer complex (EC 1.4.1.2) from Thermotoga maritima	55% id, 98% cov
P93541: glutamate dehydrogenase (EC 1.4.1.2) from Solanum lycopersicum	50% id, 93% cov
Q852M0: glutamate dehydrogenase (EC 1.4.1.2) from Oryza sativa	49% id, 95% cov
GDH2 / Q38946: glutamate dehydrogenase β subunit (EC 1.4.1.2) from Arabidopsis thaliana	48% id, 95% cov
Q5QDM6: glutamate dehydrogenase (EC 1.4.1.2) from Lupinus luteus	49% id, 93% cov
gluD / GB\|AAA62756.1: NAD-specific glutamate dehydrogenase; EC 1.4.1.2 from Clostridium difficile P27346: glutamate dehydrogenase (EC 1.4.1.2) from Clostridioides difficile	47% id, 97% cov
DHE2_HALSI / P29051: NAD-specific glutamate dehydrogenase A; NAD-GDH A; EC 1.4.1.2 from Halobacterium salinarum gdhA / GB\|AAW19068.1: glutamate dehydrogenase; EC 1.4.1.2 from Halobacterium salinarum P29051: glutamate dehydrogenase (EC 1.4.1.2) from Halobacterium salinarum	48% id, 93% cov
DHE2_BACSU / P39633: Catabolic NAD-specific glutamate dehydrogenase RocG; NAD-GDH; Glutamate dehydrogenase; GlutDH; Trigger enzyme RocG; EC 1.4.1.2 from Bacillus subtilis	47% id, 94% cov
GUDB_BACSU / P50735: Cryptic catabolic NAD-specific glutamate dehydrogenase GudB; NAD-GDH; EC 1.4.1.2 from Bacillus subtilis	47% id, 94% cov
DHE2_PYRCJ / A3MUY9: NAD(+)-dependent glutamate dehydrogenase; NAD-GDH; NAD-specific glutamate dehydrogenase; EC 1.4.1.2 from Pyrobaculum calidifontis A3MUY9: glutamate dehydrogenase (EC 1.4.1.2) from Pyrobaculum calidifontis	44% id, 99% cov
Q9Y8I4: glutamate dehydrogenase (EC 1.4.1.2) from Pyrobaculum islandicum	46% id, 93% cov
Q0E5I0: glutamate dehydrogenase (EC 1.4.1.2) from Halobacillus halophilus	45% id, 93% cov
DHE2_PEPAS / P28997: NAD-specific glutamate dehydrogenase; NAD-GDH; EC 1.4.1.2 from Peptoniphilus asaccharolyticus gdhA / P28997: NAD-glutamate dehydrogenase subunit (EC 1.4.1.2) from Peptoniphilus asaccharolyticus P28997: glutamate dehydrogenase (EC 1.4.1.2) from Peptoniphilus asaccharolyticus	45% id, 93% cov
Q977U6: glutamate dehydrogenase (EC 1.4.1.2) from Haloferax mediterranei	46% id, 92% cov
Q0E5H9: glutamate dehydrogenase (EC 1.4.1.2) from Halobacillus halophilus	39% id, 83% cov
DHE2_CLOSY / P24295: NAD-specific glutamate dehydrogenase; NAD-GDH; EC 1.4.1.2 from Clostridium symbiosum P24295: glutamate dehydrogenase (EC 1.4.1.2) from Clostridium symbiosum	33% id, 95% cov
Q9TVN3: glutamate dehydrogenase (EC 1.4.1.2) from Entodinium caudatum	31% id, 92% cov
P00366: glutamate dehydrogenase (EC 1.4.1.2) from Bos taurus	42% id, 67% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory