Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 2 curated entries in PaperBLAST's database that match '1.4.3.10' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 10 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
| Ac3H11_2953: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism is similar to: | PaperBLAST |
puo / P40974: putrescine oxidase subunit (EC 1.4.3.10) from Kocuria rosea | 25% id, 58% cov |
| Ac3H11_571: Thioredoxin reductase (EC 1.8.1.9) is similar to: | PaperBLAST |
puo / P40974: putrescine oxidase subunit (EC 1.4.3.10) from Kocuria rosea | 26% id, 38% cov |
| Ac3H11_1614: Opine oxidase subunit A is similar to: | PaperBLAST |
puo / P40974: putrescine oxidase subunit (EC 1.4.3.10) from Kocuria rosea | 25% id, 28% cov |
| Ac3H11_4161: COG3380: Amine oxidase, flavin-containing is similar to: | PaperBLAST |
puo / P40974: putrescine oxidase subunit (EC 1.4.3.10) from Kocuria rosea | 36% id, 15% cov |
| Ac3H11_926: Phytoene desaturase, pro-zeta-carotene producing (EC 1.-.-.-) is similar to: | PaperBLAST |
puo / P40974: putrescine oxidase subunit (EC 1.4.3.10) from Kocuria rosea | 50% id, 10% cov |
| Ac3H11_470: NAD(FAD)-utilizing dehydrogenases is similar to: | PaperBLAST |
puo / P40974: putrescine oxidase subunit (EC 1.4.3.10) from Kocuria rosea | 58% id, 8% cov |
| Ac3H11_4711: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) is similar to: | PaperBLAST |
puo / P40974: putrescine oxidase subunit (EC 1.4.3.10) from Kocuria rosea | 54% id, 8% cov |
| Ac3H11_340: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) is similar to: | PaperBLAST |
puo / P40974: putrescine oxidase subunit (EC 1.4.3.10) from Kocuria rosea | 38% id, 11% cov |
| Ac3H11_1018: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) is similar to: | PaperBLAST |
puo / P40974: putrescine oxidase subunit (EC 1.4.3.10) from Kocuria rosea | 37% id, 10% cov |
| Ac3H11_4173: Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster is similar to: | PaperBLAST |
puo / P40974: putrescine oxidase subunit (EC 1.4.3.10) from Kocuria rosea | 41% id, 9% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 196656-198230 (frame +3) on scaffold5/19 is similar to: | PaperBLAST |
puo / P40974: putrescine oxidase subunit (EC 1.4.3.10) from Kocuria rosea | 25% id, 31% cov |
| 165207-166583 (frame +3) on scaffold5/10 is similar to: | PaperBLAST |
puo / P40974: putrescine oxidase subunit (EC 1.4.3.10) from Kocuria rosea | 51% id, 11% cov |
Lawrence Berkeley National Laboratory