Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 43 curated entries in PaperBLAST's database that match '1.4.3.21' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_4104: Aminobutyraldehyde dehydrogenase (EC 1.2.1.19)
is similar to:
PaperBLAST

AOFB_MOUSE / Q8BW75: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Mus musculus

34% id,
14% cov

AOFB_RAT / P19643: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Rattus norvegicus

34% id,
14% cov

AOFB_HUMAN / P27338: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens
MAOB / P27338: monoamine oxidase B subunit (EC 1.4.3.21; EC 1.4.3.4) from Homo sapiens

41% id,
11% cov

More...

Ac3H11_4091: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
is similar to:
PaperBLAST

AOFB_RAT / P19643: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Rattus norvegicus

49% id,
7% cov

AOFB_HUMAN / P27338: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens
MAOB / P27338: monoamine oxidase B subunit (EC 1.4.3.21; EC 1.4.3.4) from Homo sapiens

49% id,
7% cov

AOFB_BOVIN / P56560: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Bos taurus

46% id,
7% cov

Ac3H11_4173: Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster
is similar to:
PaperBLAST

AOFB_HUMAN / P27338: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens
MAOB / P27338: monoamine oxidase B subunit (EC 1.4.3.21; EC 1.4.3.4) from Homo sapiens

36% id,
8% cov

AOFB_RAT / P19643: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Rattus norvegicus

34% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory