Curated BLAST for Genomes


Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 48 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_1333: Ornithine carbamoyltransferase (EC
is similar to:

HSERO_RS07185: Ornithine carbamoyltransferase (EC from Herbaspirillum seropedicae

64% id,
99% cov

OTC1A_PSESH / Q02047: Ornithine carbamoyltransferase 1, anabolic; OTCase 1; Ornithine carbamoyltransferase 1, phaseolotoxin-sensitive; SOCT; EC from Pseudomonas savastanoi

51% id,
97% cov

OTCA_PSEAE / P11724: Ornithine carbamoyltransferase, anabolic; OTCase; EC from Pseudomonas aeruginosa

49% id,
98% cov


Ac3H11_3978: Aspartate carbamoyltransferase (EC
is similar to:

OTCA_PYRFU / Q51742: Ornithine carbamoyltransferase, anabolic; OTCase; EC from Pyrococcus furiosus
Q51742: ornithine carbamoyltransferase (EC from Pyrococcus furiosus

30% id,
96% cov

OTCC_HALSA / Q48296: Ornithine carbamoyltransferase, catabolic; cOTCase; EC from Halobacterium salinarum
arcB / Q48296: ArcB (EC from Halobacterium salinarum
Q48296: ornithine carbamoyltransferase (EC from Halobacterium salinarum

28% id,
97% cov

O93656: ornithine carbamoyltransferase (EC from Pyrococcus abyssi

30% id,
93% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory