Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 26 curated entries in PaperBLAST's database that match '2.3.1.8' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_4331: NADP-dependent malic enzyme (EC 1.1.1.40)
is similar to:
PaperBLAST

EUTD_SALTY / P41790: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; Phosphotransacetylase EutD; PATC EutD; EC 2.3.1.8 from Salmonella typhimurium
P41790: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica

32% id,
97% cov

pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens

31% id,
98% cov

PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Corynebacterium glutamicum

32% id,
95% cov

More...

Ac3H11_1079: NADP-dependent malic enzyme (EC 1.1.1.40)
is similar to:
PaperBLAST

EUTD_SALTY / P41790: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; Phosphotransacetylase EutD; PATC EutD; EC 2.3.1.8 from Salmonella typhimurium
P41790: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica

32% id,
96% cov

pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens

31% id,
98% cov

PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Corynebacterium glutamicum

32% id,
95% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory