Curated BLAST
Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 33 curated entries in PaperBLAST's database that match '2.3.3.5' as complete word(s).
These curated entries have 18 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
Ac3H11_2322: 2-methylcitrate synthase (EC 2.3.3.5)
is similar to: | PaperBLAST |
PRPC_CUPNE / Q937N9: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Cupriavidus necator
Q937N9: 2-methylcitrate synthase (EC 2.3.3.5) from Cupriavidus metallidurans | 85% id,
98% cov |
Q2Z1A8: 2-methylcitrate synthase (EC 2.3.3.5) from Cupriavidus necator | 85% id,
96% cov |
Q8X694: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli | 78% id,
99% cov |
PRPC_SALTY / Q56063: 2-methylcitrate synthase; 2-MCS; mcs; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Salmonella typhimurium
prpC / Q56063: 2-methylcitrate synthase (EC 2.3.3.5) from Salmonella typhimurium
Q56063: 2-methylcitrate synthase (EC 2.3.3.5) from Salmonella enterica | 77% id,
100% cov |
PRPC_ECOLI / P31660: 2-methylcitrate synthase; 2-MCS; MCS; (2S,3S)-2-methylcitrate synthase; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Escherichia coli
YahS / b0333: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli
prpC / GB|AP_000985.1: 2-methylcitrate synthase; EC 2.3.3.5 from Escherichia coli
prpC / P31660: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli
P31660: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli | 77% id,
99% cov |
Pf6N2E2_6062: 2-methylcitrate synthase (EC 2.3.3.5) from Pseudomonas fluorescens | 54% id,
99% cov |
PRPC_SHEON / Q8EJW2: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Shewanella oneidensis
SO0344: 2-methylcitrate synthase (EC 2.3.3.5) from Shewanella oneidensis | 53% id,
99% cov |
Q9KSC1: 2-methylcitrate synthase (EC 2.3.3.5) from Vibrio cholerae | 52% id,
99% cov |
Q9I5E3: 2-methylcitrate synthase (EC 2.3.3.5) from Pseudomonas aeruginosa | 52% id,
99% cov |
PRPC_ABDS2 / O34002: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Antarctic bacterium | 41% id,
98% cov |
PRPC2_CORGL / Q8NSL1: 2-methylcitrate synthase 2; 2-MCS; MCS; Citrate synthase 2; CS; EC 2.3.3.5; EC 2.3.3.16 from Corynebacterium glutamicum
Q8NSL1: 2-methylcitrate synthase (EC 2.3.3.5) from Corynebacterium glutamicum | 41% id,
97% cov |
PRPC1_CORGL / Q8NSH7: 2-methylcitrate synthase 1; 2-MCS; MCS; Citrate synthase 1; CS; EC 2.3.3.5; EC 2.3.3.16 from Corynebacterium glutamicum
Q8NSH7: 2-methylcitrate synthase (EC 2.3.3.5) from Corynebacterium glutamicum | 40% id,
98% cov |
PRPC_MYCTE / H8F0D7: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; CS; EC 2.3.3.5; EC 2.3.3.16 from Mycobacterium tuberculosis
PRPC_MYCTU / I6Y9Q3: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Mycobacterium tuberculosis | 39% id,
95% cov |
More... |
Ac3H11_3161: Citrate synthase (si) (EC 2.3.3.1)
is similar to: | PaperBLAST |
Pf6N2E2_6062: 2-methylcitrate synthase (EC 2.3.3.5) from Pseudomonas fluorescens | 33% id,
97% cov |
Q9I5E3: 2-methylcitrate synthase (EC 2.3.3.5) from Pseudomonas aeruginosa | 32% id,
97% cov |
PRPC_SHEON / Q8EJW2: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Shewanella oneidensis
SO0344: 2-methylcitrate synthase (EC 2.3.3.5) from Shewanella oneidensis | 31% id,
99% cov |
PRPC_ABDS2 / O34002: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Antarctic bacterium | 31% id,
99% cov |
PRPC2_CORGL / Q8NSL1: 2-methylcitrate synthase 2; 2-MCS; MCS; Citrate synthase 2; CS; EC 2.3.3.5; EC 2.3.3.16 from Corynebacterium glutamicum
Q8NSL1: 2-methylcitrate synthase (EC 2.3.3.5) from Corynebacterium glutamicum | 31% id,
97% cov |
PRPC1_CORGL / Q8NSH7: 2-methylcitrate synthase 1; 2-MCS; MCS; Citrate synthase 1; CS; EC 2.3.3.5; EC 2.3.3.16 from Corynebacterium glutamicum
Q8NSH7: 2-methylcitrate synthase (EC 2.3.3.5) from Corynebacterium glutamicum | 30% id,
98% cov |
PRPC_CUPNE / Q937N9: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Cupriavidus necator
Q937N9: 2-methylcitrate synthase (EC 2.3.3.5) from Cupriavidus metallidurans | 31% id,
95% cov |
Q8X694: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli | 29% id,
99% cov |
Q9KSC1: 2-methylcitrate synthase (EC 2.3.3.5) from Vibrio cholerae | 30% id,
97% cov |
PRPC_ECOLI / P31660: 2-methylcitrate synthase; 2-MCS; MCS; (2S,3S)-2-methylcitrate synthase; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Escherichia coli
YahS / b0333: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli
prpC / GB|AP_000985.1: 2-methylcitrate synthase; EC 2.3.3.5 from Escherichia coli
prpC / P31660: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli
P31660: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli | 29% id,
99% cov |
Q2Z1A8: 2-methylcitrate synthase (EC 2.3.3.5) from Cupriavidus necator | 31% id,
92% cov |
PRPC_SALTY / Q56063: 2-methylcitrate synthase; 2-MCS; mcs; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Salmonella typhimurium
prpC / Q56063: 2-methylcitrate synthase (EC 2.3.3.5) from Salmonella typhimurium
Q56063: 2-methylcitrate synthase (EC 2.3.3.5) from Salmonella enterica | 30% id,
93% cov |
PRPC_MYCTE / H8F0D7: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; CS; EC 2.3.3.5; EC 2.3.3.16 from Mycobacterium tuberculosis
PRPC_MYCTU / I6Y9Q3: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Mycobacterium tuberculosis | 29% id,
92% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory