Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 5 curated entries in PaperBLAST's database that match '2.6.1.36' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_4179: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

37% id,
91% cov

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

29% id,
89% cov

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

28% id,
89% cov

More...

Ac3H11_1332: Acetylornithine aminotransferase (EC 2.6.1.11)
is similar to:
PaperBLAST

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

30% id,
92% cov

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

29% id,
92% cov

CA265_RS14455: L-lysine 6-transaminase (EC 2.6.1.36) from Pedobacter sp.

26% id,
97% cov

More...

Ac3H11_4342: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

29% id,
91% cov

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

25% id,
90% cov

lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus

21% id,
90% cov

More...

Ac3H11_3828: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
is similar to:
PaperBLAST

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

25% id,
99% cov

lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus

25% id,
89% cov

Ac3H11_3991: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

30% id,
74% cov

lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus

26% id,
73% cov

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

26% id,
61% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory