Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 29 curated entries in PaperBLAST's database that match '2.7.1.17' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_2937: Xylulose kinase (EC 2.7.1.17)
is similar to:
PaperBLAST

Dshi_1997: Xylulose kinase (EC 2.7.1.17) from Dinoroseobacter shibae

51% id,
97% cov

SMc03164: Xylulose kinase (EC 2.7.1.17) from Sinorhizobium meliloti

47% id,
99% cov

BWI76_RS27020: Xylulose kinase (EC 2.7.1.17) from Klebsiella michiganensis

56% id,
80% cov

More...

Ac3H11_789: Glycerol kinase (EC 2.7.1.30)
is similar to:
PaperBLAST

XYLB_LEVBR / P35850: Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Levilactobacillus brevis

25% id,
96% cov

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

27% id,
90% cov

Q9WXX1: xylulokinase (EC 2.7.1.17) from Thermotoga maritima

25% id,
97% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory