Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
| Ac3H11_1651: Homoserine kinase (EC 2.7.1.39) is similar to: | PaperBLAST |
KHSE_PSEAE / P29364: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Pseudomonas aeruginosa | 40% id, 98% cov |
Ga0059261_3253: homoserine kinase (EC 2.7.1.39) from Sphingomonas koreensis | 34% id, 97% cov |
| Ac3H11_3449: Shikimate kinase I (EC 2.7.1.71) is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 36% id, 76% cov |
| Ac3H11_3086: Regulatory protein of benzoate catabolism is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 23% id, 86% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 131772-132497 (frame +3) on scaffold5/18 is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 36% id, 85% cov |
Lawrence Berkeley National Laboratory