Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 32 curated entries in PaperBLAST's database that match '2.7.1.71' as complete word(s).
These curated entries have 17 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
| Ac3H11_3449: Shikimate kinase I (EC 2.7.1.71) is similar to: | PaperBLAST |
A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii | 47% id, 90% cov |
AROK_MYCTU / P9WPY3: Shikimate kinase; SK; EC 2.7.1.71 from Mycobacterium tuberculosis | 39% id, 99% cov |
AROK_ECOLI / P0A6D7: Shikimate kinase 1; SK 1; Shikimate kinase I; SKI; EC 2.7.1.71 from Escherichia coli | 39% id, 94% cov |
| Ac3H11_3086: Regulatory protein of benzoate catabolism is similar to: | PaperBLAST |
AROL_DICCH / P10880: Shikimate kinase 2; SK 2; Shikimate kinase II; SKII; EC 2.7.1.71 from Dickeya chrysanthemi | 31% id, 98% cov |
CCNA_03103: shikimate kinase (EC 2.7.1.71) from Caulobacter crescentus | 34% id, 89% cov |
AROK_ECOLI / P0A6D7: Shikimate kinase 1; SK 1; Shikimate kinase I; SKI; EC 2.7.1.71 from Escherichia coli | 32% id, 92% cov |
| Ac3H11_3229: Gluconokinase (EC 2.7.1.12) is similar to: | PaperBLAST |
CCNA_03103: shikimate kinase (EC 2.7.1.71) from Caulobacter crescentus | 32% id, 37% cov |
| Ac3H11_2576: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) / Cytidylate kinase (EC 2.7.4.25) is similar to: | PaperBLAST |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 36% id, 33% cov |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 37% id, 30% cov |
| Ac3H11_4705: 3-dehydroquinate synthase (EC 4.2.3.4) is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 41% id, 21% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 39% id, 14% cov |
| Ac3H11_1226: Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) is similar to: | PaperBLAST |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 26% id, 18% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 131772-132497 (frame +3) on scaffold5/18 is similar to: | PaperBLAST |
A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii | 45% id, 97% cov |
CCNA_03103: shikimate kinase (EC 2.7.1.71) from Caulobacter crescentus | 34% id, 99% cov |
SK2_ORYSJ / Q5NTH3: Shikimate kinase 2, chloroplastic; OsSK2; EC 2.7.1.71 from Oryza sativa | 34% id, 63% cov |
Lawrence Berkeley National Laboratory