Curated BLAST
Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 7 curated entries in PaperBLAST's database that match '2.8.3.13' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
Ac3H11_3532: L-carnitine dehydratase/bile acid-inducible protein F
is similar to: | PaperBLAST |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 61% id,
100% cov |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 60% id,
100% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 52% id,
95% cov |
SUCHY_MOUSE / Q7TNE1: Succinyl-CoA:glutarate CoA-transferase; Dicarboxyl-CoA:dicarboxylic acid coenzyme A transferase SUGCT; Succinate--hydroxymethylglutarate CoA-transferase; EC 2.8.3.-; EC 2.8.3.13 from Mus musculus | 40% id,
92% cov |
SUCHY_HUMAN / Q9HAC7: Succinyl-CoA:glutarate CoA-transferase; Dermal papilla-derived protein 13; Dicarboxyl-CoA:dicarboxylic acid coenzyme A transferase SUGCT; Succinate--hydroxymethylglutarate CoA-transferase; EC 2.8.3.-; EC 2.8.3.13 from Homo sapiens | 40% id,
91% cov |
SUGCT / Q9HAC7: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens
Q9HAC7: succinate-hydroxymethylglutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens | 40% id,
89% cov |
More... |
Ac3H11_198: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
is similar to: | PaperBLAST |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 37% id,
99% cov |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 37% id,
99% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 35% id,
96% cov |
SUCHY_MOUSE / Q7TNE1: Succinyl-CoA:glutarate CoA-transferase; Dicarboxyl-CoA:dicarboxylic acid coenzyme A transferase SUGCT; Succinate--hydroxymethylglutarate CoA-transferase; EC 2.8.3.-; EC 2.8.3.13 from Mus musculus | 33% id,
90% cov |
SUCHY_HUMAN / Q9HAC7: Succinyl-CoA:glutarate CoA-transferase; Dermal papilla-derived protein 13; Dicarboxyl-CoA:dicarboxylic acid coenzyme A transferase SUGCT; Succinate--hydroxymethylglutarate CoA-transferase; EC 2.8.3.-; EC 2.8.3.13 from Homo sapiens | 32% id,
90% cov |
SUGCT / Q9HAC7: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens
Q9HAC7: succinate-hydroxymethylglutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens | 32% id,
88% cov |
More... |
Ac3H11_369: CAIB/BAIF family protein
is similar to: | PaperBLAST |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 35% id,
100% cov |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 34% id,
100% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 34% id,
97% cov |
SUCHY_MOUSE / Q7TNE1: Succinyl-CoA:glutarate CoA-transferase; Dicarboxyl-CoA:dicarboxylic acid coenzyme A transferase SUGCT; Succinate--hydroxymethylglutarate CoA-transferase; EC 2.8.3.-; EC 2.8.3.13 from Mus musculus | 28% id,
93% cov |
SUCHY_HUMAN / Q9HAC7: Succinyl-CoA:glutarate CoA-transferase; Dermal papilla-derived protein 13; Dicarboxyl-CoA:dicarboxylic acid coenzyme A transferase SUGCT; Succinate--hydroxymethylglutarate CoA-transferase; EC 2.8.3.-; EC 2.8.3.13 from Homo sapiens | 28% id,
93% cov |
SUGCT / Q9HAC7: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens
Q9HAC7: succinate-hydroxymethylglutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens | 28% id,
91% cov |
More... |
Ac3H11_2782: L-carnitine dehydratase/bile acid-inducible protein F
is similar to: | PaperBLAST |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 33% id,
96% cov |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 31% id,
95% cov |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 30% id,
95% cov |
SUCHY_HUMAN / Q9HAC7: Succinyl-CoA:glutarate CoA-transferase; Dermal papilla-derived protein 13; Dicarboxyl-CoA:dicarboxylic acid coenzyme A transferase SUGCT; Succinate--hydroxymethylglutarate CoA-transferase; EC 2.8.3.-; EC 2.8.3.13 from Homo sapiens | 29% id,
86% cov |
SUGCT / Q9HAC7: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens
Q9HAC7: succinate-hydroxymethylglutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens | 29% id,
85% cov |
SUCHY_MOUSE / Q7TNE1: Succinyl-CoA:glutarate CoA-transferase; Dicarboxyl-CoA:dicarboxylic acid coenzyme A transferase SUGCT; Succinate--hydroxymethylglutarate CoA-transferase; EC 2.8.3.-; EC 2.8.3.13 from Mus musculus | 29% id,
87% cov |
More... |
Ac3H11_4118: Far-related protein
is similar to: | PaperBLAST |
SUCHY_HUMAN / Q9HAC7: Succinyl-CoA:glutarate CoA-transferase; Dermal papilla-derived protein 13; Dicarboxyl-CoA:dicarboxylic acid coenzyme A transferase SUGCT; Succinate--hydroxymethylglutarate CoA-transferase; EC 2.8.3.-; EC 2.8.3.13 from Homo sapiens | 25% id,
61% cov |
SUGCT / Q9HAC7: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens
Q9HAC7: succinate-hydroxymethylglutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens | 25% id,
60% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory