Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 7 curated entries in PaperBLAST's database that match '3.1.1.57' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_1186: 2-pyrone-4,6-dicarboxylic acid hydrolase
is similar to:
PaperBLAST

LIGI_COMTE / Q93PS7: 2-pyrone-4,6-dicarbaxylate hydrolase; PDC hydrolase; 2-pyrone-4,6-dicarboxylate lactonase; EC 3.1.1.57 from Comamonas testosteroni
pmdD / Q93PS7: 2-pyrone-4,6-dicarboxylate hydrolase (EC 3.1.1.57) from Comamonas testosteroni

89% id,
99% cov

proL / Q75T30: 2-pyrone-4,6-dicarboxylate hydrolase (EC 3.1.1.57) from Pseudomonas straminea

88% id,
99% cov

D1MW98: 2-pyrone-4,6-dicarboxylate lactonase (EC 3.1.1.57) from Comamonas sp.

88% id,
99% cov

More...

Ac3H11_139: putative 2-pyrone-4,6-dicarboxylic acid hydrolase
is similar to:
PaperBLAST

LIGI_SPHSK / O87170: 2-pyrone-4,6-dicarboxylate hydrolase; PDC hydrolase; 2-pyrone-4,6-dicarboxylate lactonase; EC 3.1.1.57 from Sphingobium sp.
ligI / O87170: 2-pyrone-4,6-dicarboxylate hydrolase (EC 3.1.1.57) from Sphingobium sp.
O87170: 2-pyrone-4,6-dicarboxylate lactonase (EC 3.1.1.57) from Sphingomonas paucimobilis

35% id,
94% cov

D1MW98: 2-pyrone-4,6-dicarboxylate lactonase (EC 3.1.1.57) from Comamonas sp.

35% id,
93% cov

LIGI_COMTE / Q93PS7: 2-pyrone-4,6-dicarbaxylate hydrolase; PDC hydrolase; 2-pyrone-4,6-dicarboxylate lactonase; EC 3.1.1.57 from Comamonas testosteroni
pmdD / Q93PS7: 2-pyrone-4,6-dicarboxylate hydrolase (EC 3.1.1.57) from Comamonas testosteroni

35% id,
93% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory