Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 15 curated entries in PaperBLAST's database that match '3.7.1.2' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_4507: Fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

SO1670: fumarylacetoacetate hydrolase (EC 3.7.1.2) from Shewanella oneidensis

59% id,
99% cov

Psest_3512: fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2) from Pseudomonas stutzeri

56% id,
98% cov

Ac3H11_3715: Fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

Psest_3512: fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2) from Pseudomonas stutzeri

49% id,
98% cov

SO1670: fumarylacetoacetate hydrolase (EC 3.7.1.2) from Shewanella oneidensis

48% id,
99% cov

Ac3H11_4136: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase.
is similar to:
PaperBLAST

A0A076VF18: fumarylacetoacetase (EC 3.7.1.2) from Rhodotorula diobovata

34% id,
87% cov

Ac3H11_1487: 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)
is similar to:
PaperBLAST

A0A076VF18: fumarylacetoacetase (EC 3.7.1.2) from Rhodotorula diobovata

35% id,
72% cov

Ac3H11_2742: Fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

A0A076VF18: fumarylacetoacetase (EC 3.7.1.2) from Rhodotorula diobovata

31% id,
75% cov

Ac3H11_2765: Fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

SO1670: fumarylacetoacetate hydrolase (EC 3.7.1.2) from Shewanella oneidensis

25% id,
78% cov

Ac3H11_213: Fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

A0A076VF18: fumarylacetoacetase (EC 3.7.1.2) from Rhodotorula diobovata

32% id,
58% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory