Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 7 curated entries in PaperBLAST's database that match '4.1.2.28' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
| Ac3H11_277: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) is similar to: | PaperBLAST |
YJHH_ECOLI / P39359: Probable 2-dehydro-3-deoxy-D-pentonate aldolase YjhH; EC 4.1.2.28 from Escherichia coli | 31% id, 98% cov |
| Ac3H11_4168: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) is similar to: | PaperBLAST |
YJHH_ECOLI / P39359: Probable 2-dehydro-3-deoxy-D-pentonate aldolase YjhH; EC 4.1.2.28 from Escherichia coli | 28% id, 94% cov |
| Ac3H11_1501: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) is similar to: | PaperBLAST |
YAGE_ECOLI / P75682: Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE; KDG aldolase YagE; Putative 2-dehydro-3-deoxy-D-pentonate aldolase YagE; EC 4.1.2.51; EC 4.1.2.28 from Escherichia coli | 31% id, 81% cov |
YJHH_ECOLI / P39359: Probable 2-dehydro-3-deoxy-D-pentonate aldolase YjhH; EC 4.1.2.28 from Escherichia coli | 28% id, 80% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory