Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 90 curated entries in PaperBLAST's database that match '4.1.2.4'.
These curated entries have 57 distinct sequences.
Running ublast with E ≤ 0.01
Found 15 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
| Ac3H11_3085: Benzoyl-CoA-dihydrodiol lyase (EC 4.1.2.44) is similar to: | PaperBLAST |
BOXC_AROEV / Q84HH6: Benzoyl-CoA-dihydrodiol lyase; EC 4.1.2.44 from Aromatoleum evansii | 67% id, 98% cov |
| Ac3H11_2921: Serine hydroxymethyltransferase (EC 2.1.2.1) is similar to: | PaperBLAST |
P0A825: low-specificity L-threonine aldolase (EC 4.1.2.48) from Escherichia coli | 63% id, 100% cov |
GLYA_HYDTT / D3DKC4: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-threonine/L-allo-threonine aldolase; EC 2.1.2.1; EC 4.1.2.48 from Hydrogenobacter thermophilus | 61% id, 95% cov |
GLYA_METJA / Q58992: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-allo-threonine aldolase; EC 2.1.2.-; EC 4.1.2.49 from Methanocaldococcus jannaschii | 37% id, 87% cov |
| Ac3H11_4475: Low-specificity L-threonine aldolase (EC 4.1.2.48) is similar to: | PaperBLAST |
LTAA_AERJA / O07051: L-allo-threonine aldolase; L-allo-TA; L-allo-threonine acetaldehyde-lyase; EC 4.1.2.49 from Aeromonas jandaei | 51% id, 99% cov |
LTAE_ECOLI / P75823: Low specificity L-threonine aldolase; Low specificity L-TA; EC 4.1.2.48 from Escherichia coli | 51% id, 98% cov |
THA2_ARATH / Q9FPH3: Probable low-specificity L-threonine aldolase 2; Threonine aldolase 2; EC 4.1.2.48 from Arabidopsis thaliana | 43% id, 96% cov |
| Ac3H11_1814: low-specificity D-threonine aldolase is similar to: | PaperBLAST |
A0A0J9X243: D-threonine aldolase (EC 4.1.2.42) from Achromobacter xylosoxidans | 44% id, 97% cov |
DTA_ARTSP / O82872: D-threonine aldolase; EC 4.1.2.42 from Arthrobacter sp. | 45% id, 95% cov |
A0A1C9ZZ39: D-threonine aldolase (EC 4.1.2.42) from Chlamydomonas reinhardtii | 46% id, 89% cov |
| Ac3H11_658: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) is similar to: | PaperBLAST |
gatY / Q65EY6: D-tagatose-bisphosphate aldolase (EC 4.1.2.40) from Bacillus licheniformis | 35% id, 95% cov |
GATY_ECOLI / P0C8J6: D-tagatose-1,6-bisphosphate aldolase subunit GatY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Escherichia coli | 33% id, 98% cov |
GATY_ECOLX / P0C8J7: D-tagatose-1,6-bisphosphate aldolase subunit GatY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Escherichia coli | 32% id, 98% cov |
| Ac3H11_3163: S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) is similar to: | PaperBLAST |
AHNL_LINUS / P93243: Aliphatic (R)-hydroxynitrile lyase; LuHNL; EC 4.1.2.46 from Linum usitatissimum | 33% id, 88% cov |
| Ac3H11_603: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) is similar to: | PaperBLAST |
NSAE_SPHXE / Q9X9Q6: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Sphingobium xenophagum | 26% id, 86% cov |
| Ac3H11_4168: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) is similar to: | PaperBLAST |
nahE / P0A144: trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (EC 4.1.2.45) from Pseudomonas putida | 26% id, 70% cov |
NSAE_SPHXE / Q9X9Q6: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Sphingobium xenophagum | 26% id, 65% cov |
NAHE1_PSEPU / Q51947: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Pseudomonas putida | 27% id, 50% cov |
| Ac3H11_4514: EstC is similar to: | PaperBLAST |
HNL_HEVBR / P52704: (S)-hydroxynitrile lyase; HbHNL; 2-hydroxy-2-methylpropanenitrile lyase; Acetone cyanohydrin lyase; Hydroxynitrile lyase; Oxynitrilase; EC 4.1.2.47 from Hevea brasiliensis | 32% id, 38% cov |
| Ac3H11_1931: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) is similar to: | PaperBLAST |
BOXC_AROEV / Q84HH6: Benzoyl-CoA-dihydrodiol lyase; EC 4.1.2.44 from Aromatoleum evansii | 26% id, 39% cov |
| Ac3H11_1592: Ribonuclease E (EC 3.1.26.12) is similar to: | PaperBLAST |
Q9F6B7: 3-hexulose-6-phosphate synthase (EC 4.1.2.43) from Aminomonas aminovorus | 35% id, 27% cov |
| Ac3H11_2055: Probable transcriptional regulator is similar to: | PaperBLAST |
hps-phi / Q5JD63: bifunctional 3-hexulose-6-phosphate formaldehyde lyase/6-phospho-3-hexuloisomerase (EC 4.1.2.43; EC 5.3.1.27) from Thermococcus kodakarensis | 28% id, 31% cov |
| Ac3H11_4270: Arabinose 5-phosphate isomerase (EC 5.3.1.13) is similar to: | PaperBLAST |
hps-phi / Q5JD63: bifunctional 3-hexulose-6-phosphate formaldehyde lyase/6-phospho-3-hexuloisomerase (EC 4.1.2.43; EC 5.3.1.27) from Thermococcus kodakarensis | 26% id, 30% cov |
| Ac3H11_2339: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) is similar to: | PaperBLAST |
NAHE1_PSEPU / Q51947: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Pseudomonas putida | 32% id, 23% cov |
nahE / P0A144: trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (EC 4.1.2.45) from Pseudomonas putida | 32% id, 22% cov |
| Ac3H11_336: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) is similar to: | PaperBLAST |
NAHE1_PSEPU / Q51947: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Pseudomonas putida | 32% id, 23% cov |
nahE / P0A144: trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (EC 4.1.2.45) from Pseudomonas putida | 32% id, 22% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 11 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 38633-39700 (frame -3) on scaffold5/37 is similar to: | PaperBLAST |
NSAE_SPHXE / Q9X9Q6: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Sphingobium xenophagum | 26% id, 88% cov |
Lawrence Berkeley National Laboratory