Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 3 curated entries in PaperBLAST's database that match '4.2.1.34' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
| Ac3H11_941: Fumarate hydratase class I, aerobic (EC 4.2.1.2) is similar to: | PaperBLAST |
Q141Z6: fumarate hydratase (EC 4.2.1.2); (S)-2-methylmalate dehydratase (EC 4.2.1.34) from Paraburkholderia xenovorans | 75% id, 98% cov |
P0AC33: fumarate hydratase (EC 4.2.1.2); (S)-2-methylmalate dehydratase (EC 4.2.1.34) from Escherichia coli | 33% id, 87% cov |
P14407: fumarate hydratase (EC 4.2.1.2); (S)-2-methylmalate dehydratase (EC 4.2.1.34) from Escherichia coli | 32% id, 87% cov |
| Ac3H11_639: L(+)-tartrate dehydratase alpha subunit (EC 4.2.1.32) is similar to: | PaperBLAST |
Q141Z6: fumarate hydratase (EC 4.2.1.2); (S)-2-methylmalate dehydratase (EC 4.2.1.34) from Paraburkholderia xenovorans | 28% id, 54% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 60665-62275 (frame -1) on scaffold5/25 is similar to: | PaperBLAST |
Q141Z6: fumarate hydratase (EC 4.2.1.2); (S)-2-methylmalate dehydratase (EC 4.2.1.34) from Paraburkholderia xenovorans | 74% id, 99% cov |
| 77190-78296 (frame -2) on scaffold5/37 is similar to: | PaperBLAST |
Q141Z6: fumarate hydratase (EC 4.2.1.2); (S)-2-methylmalate dehydratase (EC 4.2.1.34) from Paraburkholderia xenovorans | 28% id, 58% cov |
Lawrence Berkeley National Laboratory