Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 11 curated entries in PaperBLAST's database that match '4.2.1.41' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
| Ac3H11_336: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) is similar to: | PaperBLAST |
B7WZA5: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Comamonas testosteroni | 88% id, 100% cov |
A1VMN2: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Polaromonas naphthalenivorans | 84% id, 100% cov |
HSERO_RS15785: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Herbaspirillum seropedicae | 77% id, 99% cov |
| Ac3H11_2339: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) is similar to: | PaperBLAST |
B7WZA5: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Comamonas testosteroni | 87% id, 100% cov |
A1VMN2: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Polaromonas naphthalenivorans | 85% id, 100% cov |
HSERO_RS15785: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Herbaspirillum seropedicae | 77% id, 99% cov |
| Ac3H11_277: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) is similar to: | PaperBLAST |
A1VMN2: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Polaromonas naphthalenivorans | 25% id, 97% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory