Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 8 curated entries in PaperBLAST's database that match '4.2.1.42' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
| Ac3H11_3953: D-galactarate dehydratase (EC 4.2.1.42) is similar to: | PaperBLAST |
HSERO_RS15800: Galactarate dehydratase (EC 4.2.1.42) from Herbaspirillum seropedicae | 72% id, 97% cov |
PS417_04210: Galactarate dehydratase (EC 4.2.1.42) from Pseudomonas simiae | 63% id, 98% cov |
GARD_ECOLI / P39829: Galactarate dehydratase (L-threo-forming); GalcD; EC 4.2.1.42 from Escherichia coli | 61% id, 98% cov |
| Ac3H11_600: Galactonate dehydratase (EC 4.2.1.6) is similar to: | PaperBLAST |
Q8EMJ9: galactarate dehydratase (D-threo-forming) (EC 4.2.1.158); galactarate dehydratase (EC 4.2.1.42) from Oceanobacillus iheyensis | 27% id, 93% cov |
TAGAD_SALTY / Q8ZL58: L-talarate/galactarate dehydratase; TalrD/GalrD; StTGD; EC 4.2.1.156; EC 4.2.1.42 from Salmonella typhimurium | 28% id, 81% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 177102-178697 (frame -1) on scaffold5/0 is similar to: | PaperBLAST |
HSERO_RS15800: Galactarate dehydratase (EC 4.2.1.42) from Herbaspirillum seropedicae | 71% id, 99% cov |
Lawrence Berkeley National Laboratory