Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 38 curated entries in PaperBLAST's database that match '4.4.1.5' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_2251: Lactoylglutathione lyase (EC 4.4.1.5)
is similar to:
PaperBLAST

LGUL_ECOLI / P0AC81: Lactoylglutathione lyase; Aldoketomutase; Glyoxalase I; Glx I; Ketone-aldehyde mutase; Methylglyoxalase; S-D-lactoylglutathione methylglyoxal lyase; EC 4.4.1.5 from Escherichia coli
GloA / b1651: glyoxalase I (EC 4.4.1.5) from Escherichia coli
gloA / RF|NP_416168.1: lactoylglutathione lyase; EC 4.4.1.5 from Shigella flexneri
gloA / P0AC81: lactoylglutathione lyase (EC 4.4.1.5) from Escherichia coli
P0AC81: lactoylglutathione lyase (EC 4.4.1.5) from Escherichia coli

74% id,
95% cov

Q9HY85: lactoylglutathione lyase (EC 4.4.1.5) from Pseudomonas aeruginosa

66% id,
95% cov

P0A0T3: lactoylglutathione lyase (EC 4.4.1.5) from Neisseria meningitidis

61% id,
89% cov

More...

Ac3H11_506: biphenyl-2,3-diol 1,2-dioxygenase III-related protein
is similar to:
PaperBLAST

Q8ZM36: lactoylglutathione lyase (EC 4.4.1.5) from Salmonella enterica

47% id,
89% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

486739-487170 (frame -2) on scaffold5/16
is similar to:
PaperBLAST

LGUL_ECOLI / P0AC81: Lactoylglutathione lyase; Aldoketomutase; Glyoxalase I; Glx I; Ketone-aldehyde mutase; Methylglyoxalase; S-D-lactoylglutathione methylglyoxal lyase; EC 4.4.1.5 from Escherichia coli
GloA / b1651: glyoxalase I (EC 4.4.1.5) from Escherichia coli
gloA / RF|NP_416168.1: lactoylglutathione lyase; EC 4.4.1.5 from Shigella flexneri
gloA / P0AC81: lactoylglutathione lyase (EC 4.4.1.5) from Escherichia coli
P0AC81: lactoylglutathione lyase (EC 4.4.1.5) from Escherichia coli
Also see hits to annotated proteins above

74% id,
99% cov

Q9HY85: lactoylglutathione lyase (EC 4.4.1.5) from Pseudomonas aeruginosa
Also see hits to annotated proteins above

66% id,
100% cov

P0A0T3: lactoylglutathione lyase (EC 4.4.1.5) from Neisseria meningitidis
Also see hits to annotated proteins above

62% id,
93% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory