Curated BLAST for Genomes


Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 12 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_2274: Methylmalonyl-CoA epimerase (EC
is similar to:

Dsui_0512: Methylmalonyl-CoA epimerase (EC from Dechlorosoma suillum

82% id,
96% cov

Msed_0639 / A4YEG2: methylmalonyl-CoA epimerase monomer (EC from Metallosphaera sedula
A4YEG2: methylmalonyl-CoA epimerase (EC from Metallosphaera sedula

23% id,
98% cov

MCE_PYRHO / O58010: Methylmalonyl-CoA epimerase; DL-methylmalonyl-CoA racemase; EC from Pyrococcus horikoshii

23% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory