Curated BLAST for Genomes


Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 90 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 57 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_1454: Triosephosphate isomerase (EC
is similar to:

TPIS_CAEEL / Q10657: Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; EC; EC from Caenorhabditis elegans
Q10657: triose-phosphate isomerase (EC from Caenorhabditis elegans

52% id,
99% cov

P52270: triose-phosphate isomerase (EC from Trypanosoma cruzi

50% id,
100% cov

TPIS_THET8 / Q5SJR1: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC from Thermus thermophilus

48% id,
99% cov


Ac3H11_4404: Phosphoglycerate kinase (EC
is similar to:

PGKT_THEMA / P36204: Bifunctional PGK/TIM; EC; EC from Thermotoga maritima
pgk / P36204: Pgk (EC; EC from Thermotoga maritima
P36204: triose-phosphate isomerase (EC from Thermotoga maritima

46% id,
58% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory