Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 18 curated entries in PaperBLAST's database that match '5.3.1.24' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
| Ac3H11_1533: Phosphoribosylanthranilate isomerase (EC 5.3.1.24) is similar to: | PaperBLAST |
trpF: phosphoribosylanthranilate isomerase; EC 5.3.1.24 from Burkholderia multivorans | 48% id, 96% cov |
trpF / GB|AAA21897.1: phosphoribosylanthranilate isomerase; EC 5.3.1.24 from Acinetobacter calcoaceticus | 42% id, 100% cov |
trpF / Q56320: phosphoribosylanthranilate isomerase subunit (EC 5.3.1.24) from Thermotoga maritima | 39% id, 97% cov |
| Ac3H11_4732: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) is similar to: | PaperBLAST |
HIS4_STRCO / P16250: Phosphoribosyl isomerase A; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; N-(5'-phosphoribosyl)anthranilate isomerase; PRAI; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; EC 5.3.1.16; EC 5.3.1.24 from Streptomyces coelicolor | 36% id, 93% cov |
| Ac3H11_4733: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) is similar to: | PaperBLAST |
HIS4_STRCO / P16250: Phosphoribosyl isomerase A; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; N-(5'-phosphoribosyl)anthranilate isomerase; PRAI; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; EC 5.3.1.16; EC 5.3.1.24 from Streptomyces coelicolor | 28% id, 85% cov |
| Ac3H11_772: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) is similar to: | PaperBLAST |
TrpC / b1262: fused indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (EC 4.1.1.48; EC 5.3.1.24) from Escherichia coli | 40% id, 56% cov |
P24920: phosphoribosylanthranilate isomerase (EC 5.3.1.24) from Phytophthora parasitica | 34% id, 45% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 40821-41627 (frame +3) on scaffold5/15 is similar to: | PaperBLAST |
HIS4_STRCO / P16250: Phosphoribosyl isomerase A; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; N-(5'-phosphoribosyl)anthranilate isomerase; PRAI; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; EC 5.3.1.16; EC 5.3.1.24 from Streptomyces coelicolor | 28% id, 98% cov |
Lawrence Berkeley National Laboratory