Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 17 curated entries in PaperBLAST's database that match '5.3.1.7' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_2078: D-mannose isomerase (EC 5.3.1.7)
is similar to:
PaperBLAST

Ac3H11_2078: D-mannose isomerase (EC 5.3.1.7) from Acidovorax sp.

100% id,
100% cov

BPHYT_RS02050: D-mannose isomerase (EC 5.3.1.7) from Burkholderia phytofirmans

57% id,
96% cov

MANI_MARM1 / F2JVT6: D-mannose isomerase; MI; EC 5.3.1.7 from Marinomonas mediterranea

51% id,
98% cov

More...

Ac3H11_2080: hypothetical protein
is similar to:
PaperBLAST

Ac3H11_2078: D-mannose isomerase (EC 5.3.1.7) from Acidovorax sp.

58% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory