Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 12 curated entries in PaperBLAST's database that match '5.3.2.6' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_4833: 4-oxalocrotonate tautomerase
is similar to:
PaperBLAST

4OT_BACSU / P70994: 2-hydroxymuconate tautomerase; (2Z,4E)-2-hydroxyhexa-2,4-dienedioate keto-enol isomerase; 4-oxalocrotonate tautomerase; 4-OT; EC 5.3.2.6 from Bacillus subtilis

43% id,
90% cov

A2SL37: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Methylibium petroleiphilum

41% id,
79% cov

4OT1_PSEPU / Q01468: 2-hydroxymuconate tautomerase; 4-oxalocrotonate tautomerase; 4-OT; EC 5.3.2.6 from Pseudomonas putida
xylH / Q01468: 4-oxalocrotonate tautomerase subunit (EC 5.3.2.6) from Pseudomonas putida
Q01468: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Pseudomonas putida

32% id,
90% cov

More...

Ac3H11_1747: 4-oxalocrotonate tautomerase (EC 5.3.2.-)
is similar to:
PaperBLAST

P49172: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Pseudomonas sp.

33% id,
100% cov

Ac3H11_2374: 4-oxalocrotonate tautomerase (EC 5.3.2.-)
is similar to:
PaperBLAST

P49172: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Pseudomonas sp.

33% id,
100% cov

4OT_BACSU / P70994: 2-hydroxymuconate tautomerase; (2Z,4E)-2-hydroxyhexa-2,4-dienedioate keto-enol isomerase; 4-oxalocrotonate tautomerase; 4-OT; EC 5.3.2.6 from Bacillus subtilis

33% id,
95% cov

A9W9U6: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Chloroflexus aurantiacus

34% id,
86% cov

Ac3H11_4526: 4-oxalocrotonate tautomerase
is similar to:
PaperBLAST

cnbG / Q38M36: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Comamonas testosteroni

37% id,
83% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory