Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 4 curated entries in PaperBLAST's database that match '5.3.3.7' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
Ac3H11_2325: 2-methylaconitate cis-trans isomerase is similar to: | PaperBLAST |
Q8EJW4: aconitate DELTA-isomerase (EC 5.3.3.7) from Shewanella oneidensis | 78% id, 99% cov |
ADI1 / A0A0U2X0E4: aconitate-Δ-isomerase 1 (EC 5.3.3.7) from Ustilago maydis | 32% id, 80% cov |
Ac3H11_4370: FIG00786362: hypothetical protein is similar to: | PaperBLAST |
ADI1 / A0A0U2X0E4: aconitate-Δ-isomerase 1 (EC 5.3.3.7) from Ustilago maydis | 48% id, 79% cov |
Q8EJW4: aconitate DELTA-isomerase (EC 5.3.3.7) from Shewanella oneidensis | 32% id, 98% cov |
Ac3H11_1182: Hypothetical ABC transport system, periplasmic component is similar to: | PaperBLAST |
AIS_PSESP / A0A0A1H8I4: Aconitate isomerase; AI; EC 5.3.3.7 from Pseudomonas sp. | 39% id, 89% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
19849-20670 (frame +1) on scaffold5/14 is similar to: | PaperBLAST |
AIS_PSESP / A0A0A1H8I4: Aconitate isomerase; AI; EC 5.3.3.7 from Pseudomonas sp. | 39% id, 92% cov |
Lawrence Berkeley National Laboratory