Curated BLAST for Genomes


Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 50 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 34 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_2215: Phosphomannomutase (EC
is similar to:

ALGC_PSEAE / P26276: Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC; EC from Pseudomonas aeruginosa
algC / P26276: phosphomannomutase (EC; EC from Pseudomonas aeruginosa

58% id,
97% cov

M1T754: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC; phosphomannomutase (EC from Sphingomonas sanxanigenens

44% id,
94% cov

Q8PGN7: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC from Xanthomonas citri

35% id,
99% cov


Ac3H11_444: Phosphoglucosamine mutase (EC
is similar to:

PGMMM_THEKO / Q68BJ6: Phosphoglucomutase/phosphomannomutase; PGM/PMM; EC; EC from Thermococcus kodakarensis

34% id,
96% cov

Q8PGN7: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC from Xanthomonas citri

30% id,
100% cov

Q980S1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC; phosphomannomutase (EC from Saccharolobus solfataricus

29% id,
98% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory