Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 3 curated entries in PaperBLAST's database that match 'Glutamate--LysW ligase' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_4060: Cyanophycin synthase (EC 6.3.2.29)(EC 6.3.2.30)
is similar to:
PaperBLAST

ARGX_SULTO / Q970U6: Glutamate--LysW ligase ArgX; EC 6.3.2.- from Sulfurisphaera tokodaii

22% id,
60% cov

ARGX_SULAC / Q4J8E7: Glutamate--LysW ligase ArgX; EC 6.3.2.- from Sulfolobus acidocaldarius
argX / Q4J8E7: glutamate--LysW ligase monomer (EC 6.3.2.60) from Sulfolobus acidocaldarius

38% id,
21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory