Curated BLAST
Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 21 curated entries in PaperBLAST's database that match 'Glycine cleavage system H' as complete word(s).
These curated entries have 17 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
Ac3H11_166: Glycine cleavage system H protein
is similar to: | PaperBLAST |
GCSH_ECOLI / P0A6T9: Glycine cleavage system H protein from Escherichia coli
Gcv / b2904: glycine cleavage system H protein from Escherichia coli
gcvH / P0A6T9: glycine cleavage system H protein from Escherichia coli | 58% id,
91% cov |
GCSH_THET8 / Q5SKW9: Glycine cleavage system H protein from Thermus thermophilus | 54% id,
88% cov |
GCSH_STAAM / P64213: Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Staphylococcus aureus | 44% id,
91% cov |
gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp. | 44% id,
88% cov |
GCSH_BACSU / O32174: Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Bacillus subtilis | 41% id,
90% cov |
GCSH_ORYSJ / A3C6G9: Glycine cleavage system H protein, mitochondrial from Oryza sativa | 52% id,
70% cov |
GCSH / A8HYD5: glycine cleavage system H protein (EC 1.4.1.27) from Chlamydomonas reinhardtii | 50% id,
72% cov |
GCSH_FLATR / P46485: Glycine cleavage system H protein, mitochondrial; Lipoyl-bearing H protein from Flaveria trinervia | 48% id,
72% cov |
GCSH1_ARATH / P25855: Glycine cleavage system H protein 1, mitochondrial from Arabidopsis thaliana
GDH1 / P25855: glycine cleavage system H protein 1 (EC 1.4.1.27) from Arabidopsis thaliana | 45% id,
72% cov |
GCSH3_ARATH / Q9LQL0: Glycine cleavage system H protein 3, mitochondrial from Arabidopsis thaliana | 45% id,
71% cov |
GCSH_SCHPO / Q9HDV9: Putative glycine cleavage system H protein, mitochondrial; Glycine decarboxylase complex subunit H from Schizosaccharomyces pombe | 46% id,
70% cov |
GCSH_CHICK / P11183: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Gallus gallus | 44% id,
71% cov |
GCSH_HUMAN / P23434: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Homo sapiens
GCSH / P23434: glycine cleavage system H protein, mitochondrial (EC 1.4.1.27) from Homo sapiens | 45% id,
67% cov |
GCSH_YEAST / P39726: Glycine cleavage system H protein, mitochondrial; Glycine decarboxylase complex subunit H from Saccharomyces cerevisiae | 42% id,
71% cov |
GCSH_BOVIN / P20821: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Bos taurus | 43% id,
67% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
52054-52461 (frame +1) on scaffold5/35
is similar to: | PaperBLAST |
GCSH_ECOLI / P0A6T9: Glycine cleavage system H protein from Escherichia coli
Gcv / b2904: glycine cleavage system H protein from Escherichia coli
gcvH / P0A6T9: glycine cleavage system H protein from Escherichia coli
Also see hits to annotated proteins above | 55% id,
97% cov |
GCSH_STAAM / P64213: Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Staphylococcus aureus
Also see hits to annotated proteins above | 43% id,
95% cov |
gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp.
Also see hits to annotated proteins above | 43% id,
92% cov |
GCSH_BACSU / O32174: Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Bacillus subtilis
Also see hits to annotated proteins above | 41% id,
94% cov |
GCSH_ORYSJ / A3C6G9: Glycine cleavage system H protein, mitochondrial from Oryza sativa
Also see hits to annotated proteins above | 49% id,
77% cov |
GCSH_FLATR / P46485: Glycine cleavage system H protein, mitochondrial; Lipoyl-bearing H protein from Flaveria trinervia
Also see hits to annotated proteins above | 46% id,
81% cov |
GCSH1_ARATH / P25855: Glycine cleavage system H protein 1, mitochondrial from Arabidopsis thaliana
GDH1 / P25855: glycine cleavage system H protein 1 (EC 1.4.1.27) from Arabidopsis thaliana
Also see hits to annotated proteins above | 44% id,
80% cov |
GCSH3_ARATH / Q9LQL0: Glycine cleavage system H protein 3, mitochondrial from Arabidopsis thaliana
Also see hits to annotated proteins above | 45% id,
78% cov |
GCSH_HUMAN / P23434: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Homo sapiens
GCSH / P23434: glycine cleavage system H protein, mitochondrial (EC 1.4.1.27) from Homo sapiens
Also see hits to annotated proteins above | 44% id,
75% cov |
GCSH_BOVIN / P20821: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Bos taurus
Also see hits to annotated proteins above | 42% id,
75% cov |
More... |
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory