Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)

Found 1 curated entries in PaperBLAST's database that match 'glutamyl-tRNA(Gln) amidotransferase subunit D' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query

Ac3H11_1866: L-asparaginase (EC 3.5.1.1)
is similar to:
PaperBLAST

gatD / O26802: glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.7) from Methanothermobacter thermautotrophicus

25% id,
75% cov

Ac3H11_2391: L-asparaginase (EC 3.5.1.1)
is similar to:
PaperBLAST

gatD / O26802: glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.7) from Methanothermobacter thermautotrophicus

26% id,
63% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory