Searching in Acidovorax sp. GW101-3H11 (acidovorax_3H11)
Found 6 curated entries in PaperBLAST's database that match 'glutamylputrescine oxidase' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Acidovorax sp. GW101-3H11, or try another query
| Ac3H11_1644: D-amino acid dehydrogenase small subunit (EC 1.4.99.1) is similar to: | PaperBLAST |
AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens | 47% id, 12% cov |
| Ac3H11_797: Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) is similar to: | PaperBLAST |
PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli | 45% id, 9% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 165207-166583 (frame +3) on scaffold5/10 is similar to: | PaperBLAST |
PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli | 44% id, 15% cov |
| 235062-236480 (frame +3) on scaffold5/19 is similar to: | PaperBLAST |
AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens | 38% id, 17% cov |
Lawrence Berkeley National Laboratory