Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 4 curated entries in PaperBLAST's database that match '1.1.1.122' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS23565: D-threo-aldose 1-dehydrogenase
is similar to:
PaperBLAST

BPHYT_RS34225: L-fucose dehydrogenase (EC 1.1.1.122) from Burkholderia phytofirmans

46% id,
92% cov

FCDH_PSESP / Q52472: D-threo-aldose 1-dehydrogenase; L-fucose dehydrogenase; EC 1.1.1.122 from Pseudomonas sp.

40% id,
95% cov

AZOBR_RS13230: alcohol dehydrogenase
is similar to:
PaperBLAST

Q97YM2: D-threo-aldose 1-dehydrogenase (EC 1.1.1.122) from Saccharolobus solfataricus

33% id,
98% cov

AZOBR_RS16515: S-(hydroxymethyl)glutathione dehydrogenase
is similar to:
PaperBLAST

Q97YM2: D-threo-aldose 1-dehydrogenase (EC 1.1.1.122) from Saccharolobus solfataricus

30% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory