Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 9 curated entries in PaperBLAST's database that match '1.1.1.31' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS22360: 3-hydroxyisobutyrate dehydrogenase
is similar to:
PaperBLAST

Psest_2438: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas stutzeri

55% id,
98% cov

AO353_05985: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens

53% id,
99% cov

P9WNY5: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Mycobacterium tuberculosis

53% id,
99% cov

More...

AZOBR_RS26815: 3-hydroxyisobutyrate dehydrogenase
is similar to:
PaperBLAST

P9WNY5: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Mycobacterium tuberculosis

52% id,
99% cov

Psest_2438: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas stutzeri

47% id,
97% cov

mmsB / Q76KL5: 3-hydroxyisobutyrate dehydrogenase subunit (EC 1.1.1.31) from Pseudomonas putida
Q76KL5: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas putida

47% id,
97% cov

More...

AZOBR_RS29190: hydroxyacid dehydrogenase
is similar to:
PaperBLAST

MMSB_PSEAE / P28811: 3-hydroxyisobutyrate dehydrogenase; HIBADH; EC 1.1.1.31 from Pseudomonas aeruginosa

40% id,
96% cov

AO353_05985: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens

39% id,
98% cov

PfGW456L13_5145: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens

38% id,
97% cov

More...

AZOBR_RS07955: tartronate semialdehyde reductase
is similar to:
PaperBLAST

Psest_2438: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas stutzeri

37% id,
98% cov

AO353_05985: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens

35% id,
99% cov

PfGW456L13_5145: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens

35% id,
98% cov

More...

AZOBR_RS20875: oxidoreductase
is similar to:
PaperBLAST

AO353_05985: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens

32% id,
98% cov

mmsB / Q76KL5: 3-hydroxyisobutyrate dehydrogenase subunit (EC 1.1.1.31) from Pseudomonas putida
Q76KL5: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas putida

32% id,
98% cov

PfGW456L13_5145: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens

31% id,
98% cov

More...

AZOBR_RS06785: putative dehydrogenase with NAD(P)-binding Rossmann-fold domain
is similar to:
PaperBLAST

Psest_2438: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas stutzeri

32% id,
94% cov

MMSB_PSEAE / P28811: 3-hydroxyisobutyrate dehydrogenase; HIBADH; EC 1.1.1.31 from Pseudomonas aeruginosa

30% id,
93% cov

P9WNY5: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Mycobacterium tuberculosis

25% id,
91% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory