Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 6 curated entries in PaperBLAST's database that match '1.1.1.60' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS07955: tartronate semialdehyde reductase
is similar to:
PaperBLAST

glxR / P77161: tartronate semialdehyde reductase 2 (EC 1.1.1.60) from Escherichia coli

69% id,
100% cov

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

43% id,
99% cov

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

43% id,
99% cov

AZOBR_RS26815: 3-hydroxyisobutyrate dehydrogenase
is similar to:
PaperBLAST

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

36% id,
94% cov

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

35% id,
95% cov

glxR / P77161: tartronate semialdehyde reductase 2 (EC 1.1.1.60) from Escherichia coli

29% id,
95% cov

AZOBR_RS29190: hydroxyacid dehydrogenase
is similar to:
PaperBLAST

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

34% id,
99% cov

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

34% id,
100% cov

AZOBR_RS22360: 3-hydroxyisobutyrate dehydrogenase
is similar to:
PaperBLAST

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

35% id,
95% cov

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

35% id,
94% cov

glxR / P77161: tartronate semialdehyde reductase 2 (EC 1.1.1.60) from Escherichia coli

34% id,
66% cov

AZOBR_RS20875: oxidoreductase
is similar to:
PaperBLAST

glxR / P77161: tartronate semialdehyde reductase 2 (EC 1.1.1.60) from Escherichia coli

30% id,
96% cov

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

30% id,
96% cov

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

30% id,
95% cov

AZOBR_RS06785: putative dehydrogenase with NAD(P)-binding Rossmann-fold domain
is similar to:
PaperBLAST

glxR / P77161: tartronate semialdehyde reductase 2 (EC 1.1.1.60) from Escherichia coli

29% id,
98% cov

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

27% id,
98% cov

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

26% id,
97% cov

AZOBR_RS23650: UDP-N-acetyl-D-glucosamine dehydrogenase
is similar to:
PaperBLAST

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

22% id,
70% cov

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

21% id,
71% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory