Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 60 curated entries in PaperBLAST's database that match '1.1.1.85' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS14130: 3-isopropylmalate dehydrogenase
is similar to:
PaperBLAST

P24404: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Agrobacterium tumefaciens

64% id,
99% cov

LEU3_ACIFR / Q56268: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Acidithiobacillus ferrooxidans
Q56268: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Acidithiobacillus ferrooxidans

55% id,
99% cov

LEU3_ECOLI / P30125: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Escherichia coli
LeuB / b0073: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli
leuB / P30125: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli
P30125: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli

51% id,
98% cov

More...

AZOBR_RS11025: isocitrate dehydrogenase
is similar to:
PaperBLAST

LEU3_METJA / Q58130: 3-isopropylmalate/3-methylmalate dehydrogenase; 3-isopropylmalate dehydrogenase; 3-IPM-DH; IMDH; IPMDH; Beta-IPM dehydrogenase; D-malate dehydrogenase [decarboxylating]; EC 1.1.1.85; EC 1.1.1.n5; EC 1.1.1.83 from Methanocaldococcus jannaschii
MJ0720 / Q58130: 3-isopropylmalate dehydrogenase subunit (EC 1.1.1.85) from Methanocaldococcus jannaschii

38% id,
99% cov

LEU3_SULTO / P50455: 3-isopropylmalate dehydrogenase; 3-IPM-DH; IMDH; Beta-IPM dehydrogenase; EC 1.1.1.85 from Sulfurisphaera tokodaii
P50455: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Sulfurisphaera tokodaii

36% id,
97% cov

Q4JB37: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Sulfolobus acidocaldarius

38% id,
90% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory