Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 19 curated entries in PaperBLAST's database that match '1.1.99.6' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS05735: 2-hydroxy-acid oxidase
is similar to:		 PaperBLAST

PGA1_c29700: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Phaeobacter inhibens

 59% id,
99% cov

SMc00926: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Sinorhizobium meliloti

 60% id,
97% cov

RR42_RS17315: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Cupriavidus basilensis

 42% id,
100% cov

More...

AZOBR_RS05725: FAD-binding protein
is similar to:		 PaperBLAST

SMc00832: D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) from Sinorhizobium meliloti

 60% id,
97% cov

PGA1_c29720: D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) from Phaeobacter inhibens

 59% id,
97% cov

Psest_3841: D-lactate/glycolate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri

 57% id,
98% cov

More...

AZOBR_RS05730: 2-hydroxy-acid oxidase
is similar to:		 PaperBLAST

PGA1_c29710: D-lactate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6) from Phaeobacter inhibens

 43% id,
100% cov

SMc00833: D-lactate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6) from Sinorhizobium meliloti

 41% id,
99% cov

RR42_RS17310: D-lactate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6) from Cupriavidus basilensis

 39% id,
96% cov

More...

AZOBR_RS12240: 2-hydroxy-acid oxidase
is similar to:		 PaperBLAST

DLD_ANAHA / D4MUV9: D-lactate dehydrogenase; EC 1.1.99.6 from Anaerostipes hadrus

 33% id,
97% cov

E6N788: (S)-2-hydroxy-acid oxidase (EC 1.1.3.15); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Candidatus Caldarchaeum

 33% id,
98% cov

G4RPF4: D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Thermoproteus tenax

 32% id,
100% cov

More...

AZOBR_RS05770: 2-hydroxyacid dehydrogenase
is similar to:		 PaperBLAST

DLD_ARCFU / O29853: D-lactate dehydrogenase; EC 1.1.99.6 from Archaeoglobus fulgidus
O29853: D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Archaeoglobus fulgidus

 35% id,
91% cov

SMc00832: D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) from Sinorhizobium meliloti

 32% id,
93% cov

Q974L0: D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Sulfurisphaera tokodaii

 31% id,
94% cov

More...

AZOBR_RS29745: 2-hydroxyacid dehydrogenase
is similar to:		 PaperBLAST

Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix

 31% id,
99% cov

DLD_ARCFU / O29853: D-lactate dehydrogenase; EC 1.1.99.6 from Archaeoglobus fulgidus
O29853: D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Archaeoglobus fulgidus

 32% id,
91% cov

E6N788: (S)-2-hydroxy-acid oxidase (EC 1.1.3.15); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Candidatus Caldarchaeum

 30% id,
97% cov

More...

AZOBR_RS27050: FAD-dependent oxidoreductase
is similar to:		 PaperBLAST

Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix

 30% id,
99% cov

SMc00832: D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) from Sinorhizobium meliloti

 30% id,
95% cov

DLD_ARCFU / O29853: D-lactate dehydrogenase; EC 1.1.99.6 from Archaeoglobus fulgidus
O29853: D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Archaeoglobus fulgidus

 30% id,
91% cov

More...

AZOBR_RS25120: 4Fe-4S ferredoxin
is similar to:		 PaperBLAST

Psest_3839: D-lactate/glycolate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri

 26% id,
86% cov

DLD_ARCFU / O29853: D-lactate dehydrogenase; EC 1.1.99.6 from Archaeoglobus fulgidus
O29853: D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Archaeoglobus fulgidus

 25% id,
69% cov

G4RPF4: D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Thermoproteus tenax

 28% id,
59% cov

More...

AZOBR_RS01615: Fe-S oxidoreductase
is similar to:		 PaperBLAST

Psest_3839: D-lactate/glycolate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri

 28% id,
60% cov

SMc00926: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Sinorhizobium meliloti

 29% id,
56% cov

PGA1_c29700: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Phaeobacter inhibens

 28% id,
54% cov

AZOBR_RS25115: Fe-S oxidoreductase
is similar to:		 PaperBLAST

SMc00926: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Sinorhizobium meliloti

 28% id,
53% cov

PGA1_c29700: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Phaeobacter inhibens

 28% id,
54% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory