Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 11 curated entries in PaperBLAST's database that match '1.3.1.12' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS20490: cyclohexadienyl dehydrogenase
is similar to:
PaperBLAST

J9XQS6: prephenate dehydrogenase (EC 1.3.1.12) from uncultured bacterium

59% id,
85% cov

TYRC_ZYMMO / Q04983: Cyclohexadienyl dehydrogenase; Arogenate dehydrogenase; ADH; Prephenate dehydrogenase; PDH; EC 1.3.1.43; EC 1.3.1.12 from Zymomonas mobilis

41% id,
97% cov

O67636: prephenate dehydrogenase (EC 1.3.1.12) from Aquifex aeolicus

36% id,
91% cov

More...

AZOBR_RS03855: prephenate dehydratase
is similar to:
PaperBLAST

O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus

30% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory